If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 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'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 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=> 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 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=> 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 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'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 'chi', 'CARHR237000' => 'chi', 'CARHR242100' => 'chi', 'Carub.0001s1172' => 'cru', 'Carub.0002s0252' => 'cru', 'Carub.0003s1885' => 'cru', 'Carub.0003s2292' => 'cru', 'Carub.0003s2477' => 'cru', 'Carub.0003s3406' => 'cru', 'Carub.0006s2341' => 'cru', 'Carub.0007s1136' => 'cru', 'Carub.0007s1236' => 'cru', 'Carub.0007s2255' => 'cru', 'Carub.0007s2928' => 'cru', 'Ca_12467_v3' => 'car', 'Ca_12474_v3' => 'car', 'Ca_15980_v3' => 'car', 'Ca_17374_v3' => 'car', 'Ca_18936_v3' => 'car', 'Ca_25518_v3' => 'car', 'Ca_25594_v3' => 'car', 'Cc02_g18300' => 'ccan', 'Cc03_g04160' => 'ccan', 'Cc05_g07450' => 'ccan', 'Cc06_g09480' => 'ccan', 'Cc06_g10710' => 'ccan', 'Cc06_g23480' => 'ccan', 'Cc10_g03700' => 'ccan', 'CDE02G0542' => 'cde', 'CDE02G2543' => 'cde', 'CDE03G0377' => 'cde', 'CDE04G2450' => 'cde', 'CDE04G3283' => 'cde', 'CDE05G0105' => 'cde', 'CDE05G0421' => 'cde', 'CDE05G3254' => 'cde', 'CDE06G1824' => 'cde', 'CDE10G0614' => 'cde', 'CDE10G0900' => 'cde', 'CDE11G0685' => 'cde', 'Cfa002232' => 'cfa', 'Cfa003156' => 'cfa', 'Cfa003280' => 'cfa', 'Cfa004940' => 'cfa', 'Cfa005610' => 'cfa', 'Cfa008458' => 'cfa', 'Cfa012871' => 'cfa', 'Cfa014638' => 'cfa', 'Cfa018485' => 'cfa', 'Ciclev10004988m.g' => 'ccl', 'Ciclev10005037m.g' => 'ccl', 'Ciclev10008452m.g' => 'ccl', 'Ciclev10010264m.g' => 'ccl', 'Ciclev10010678m.g' => 'ccl', 'Ciclev10010708m.g' => 'ccl', 'Ciclev10013921m.g' => 'ccl', 'Ciclev10013922m.g' => 'ccl', 'Ciclev10018109m.g' => 'ccl', 'CiPaw.01G197000' => 'cil', 'CiPaw.03G179100' => 'cil', 'CiPaw.03G221700' => 'cil', 'CiPaw.03G234200' => 'cil', 'CiPaw.04G154700' => 'cil', 'CiPaw.04G166400' => 'cil', 'CiPaw.06G139600' => 'cil', 'CiPaw.06G139700' => 'cil', 'ClCG03G016010' => 'cla', 'ClCG06G010320' => 'cla', 'ClCG11G001990' => 'cla', 'ClCG11G002540' => 'cla', 'COL.COLO4_04156' => 'col', 'COL.COLO4_05948' => 'col', 'COL.COLO4_14425' => 'col', 'COL.COLO4_18279' => 'col', 'COL.COLO4_20682' => 'col', 'COL.COLO4_21544' => 'col', 'COL.COLO4_24076' => 'col', 'COL.COLO4_26428' => 'col', 'COL.COLO4_34891' => 'col', 'COL.COLO4_38144' => 'col', 'Cpa.g.sc23.120' => 'cpa', 'Cpa.g.sc357.3' => 'cpa', 'Cpa.g.sc62.72' => 'cpa', 'Cpa.g.sc78.38' => 'cpa', 'Cpa.g.sc83.65' => 'cpa', 'CsaV3_1G030730' => 'csa', 'CsaV3_1G039950' => 'csa', 'CsaV3_2G001730' => 'csa', 'CsaV3_2G002350' => 'csa', 'CsaV3_3G012970' => 'csa', 'CsaV3_6G000730' => 'csa', 'CsaV3_6G000740' => 'csa', 'CsaV3_6G000750' => 'csa', 'CsaV3_6G000760' => 'csa', 'CsaV3_6G000770' => 'csa', 'CsaV3_6G000780' => 'csa', 'CsaV3_7G005890' => 'csa', 'CSS0000017' => 'camsi', 'CSS0000795' => 'camsi', 'CSS0004982' => 'camsi', 'CSS0014887' => 'camsi', 'CSS0015263' => 'camsi', 'CSS0020397' => 'camsi', 'CSS0022366' => 'camsi', 'CSS0024484' => 'camsi', 'CSS0026726' => 'camsi', 'CSS0028887' => 'camsi', 'CSS0030106' => 'camsi', 'CSS0031545' => 'camsi', 'CSS0032595' => 'camsi', 'CSS0043982' => 'camsi', 'CSS0047197' => 'camsi', 'CSS0049017' => 'camsi', 'DCAR_009037' => 'dca', 'DCAR_012023' => 'dca', 'DCAR_022072' => 'dca', 'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 'gma', 'Glyma.04G035950' => 'gma', 'Glyma.05G225300' => 'gma', 'Glyma.05G232000' => 'gma', 'Glyma.06G036001' => 'gma', 'Glyma.06G290700' => 'gma', 'Glyma.07G126000' => 'gma', 'Glyma.08G032100' => 'gma', 'Glyma.08G039400' => 'gma', 'Glyma.09G188600' => 'gma', 'Glyma.10G245100' => 'gma', 'Glyma.12G116200' => 'gma', 'Glyma.20G008900' => 'gma', 'Glyma.20G149500' => 'gma', 'Gohir.A01G018900' => 'ghi', 'Gohir.A01G118000' => 'ghi', 'Gohir.A04G121501' => 'ghi', 'Gohir.A05G022050' => 'ghi', 'Gohir.A05G026800' => 'ghi', 'Gohir.A05G407600' => 'ghi', 'Gohir.A06G068600' => 'ghi', 'Gohir.A07G003950' => 'ghi', 'Gohir.A07G007500' => 'ghi', 'Gohir.A08G237250' => 'ghi', 'Gohir.A13G037200' => 'ghi', 'Gohir.A13G037300' => 'ghi', 'Gohir.A13G194900' => 'ghi', 'Gohir.D01G017500' => 'ghi', 'Gohir.D01G106366' => 'ghi', 'Gohir.D04G008000' => 'ghi', 'Gohir.D04G146501' => 'ghi', 'Gohir.D05G028700' => 'ghi', 'Gohir.D06G067200' => 'ghi', 'Gohir.D07G004400' => 'ghi', 'Gohir.D08G257850' => 'ghi', 'Gohir.D10G154700' => 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ), 'gf_id' => 'HOM05D000546', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000546' ), 'data_identifier' => 'HOM05D000546', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000546', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04410' => 'bna', 'A01p10710' => 'bna', 'A01p19800' => 'bna', 'A01p32420' => 'bna', 'A01p35470' => 'bna', 'A03p40960' => 'bna', 'A03p43680' => 'bna', 'A03p45630' => 'bna', 'A03p58860' => 'bna', 'A03p62510' => 'bna', 'A05p25920' => 'bna', 'A06p09450' => 'bna', 'A06p36260' => 'bna', 'A07p04910' => 'bna', 'A08p03900' => 'bna', 'A08p17230' => 'bna', 'A08p33060' => 'bna', 'A09p12560' => 'bna', 'A09p16260' => 'bna', 'A09p59110' => 'bna', 'A09p64130' => 'bna', 'Aa31LG10G4500' => 'aar', 'Aa31LG11G4640' => 'aar', 'Aa31LG1G2690' => 'aar', 'Aa31LG2G140' => 'aar', 'Aa31LG2G21200' => 'aar', 'Aa31LG2G22240' => 'aar', 'Aa31LG6G1410' => 'aar', 'Aa31LG8G13400' => 'aar', 'Aa31LG8G16760' => 'aar', 'Aa31LG8G5840' => 'aar', 'Aa31LG8G9290' => 'aar', 'Aa31LG9G4420' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2662' => 'aag', 'Actinidia02532' => 'ach', 'Actinidia09411' => 'ach', 'Actinidia11092' => 'ach', 'Actinidia12971' => 'ach', 'Actinidia17505' => 'ach', 'Actinidia20346' => 'ach', 'Actinidia27932' => 'ach', 'Actinidia29852' => 'ach', 'Actinidia32643' => 'ach', 'Actinidia39770' => 'ach', 'Ah.01g004110' => 'amhyb', 'Ah.01g019960' => 'amhyb', 'Ah.07g204150' => 'amhyb', 'Ah.08g218390' => 'amhyb', 'Ah.09g230380' => 'amhyb', 'Ah.10g029270' => 'amhyb', 'Ah.10g029990' => 'amhyb', 'Ah.11g043930' => 'amhyb', 'Ah.14g083420' => 'amhyb', 'AL166U10020' => 'aly', 'AL1G23280' => 'aly', 'AL2G13430' => 'aly', 'AL3G32400' => 'aly', 'AL3G37120' => 'aly', 'AL3G47670' => 'aly', 'AL3G48450' => 'aly', 'AL5G22400' => 'aly', 'AL6G37370' => 'aly', 'AL7G17420' => 'aly', 'AL7G23220' => 'aly', 'AL7G24210' => 'aly', 'AL7G35590' => 'aly', 'AL9U10340' => 'aly', 'Aqoxy1G02372' => 'aox', 'Aqoxy2G03442' => 'aox', 'Aqoxy5G01412' => 'aox', 'Aqoxy6G00922' => 'aox', 'Aqoxy7G01371' => 'aox', 'Aqoxy7G01802' => 'aox', 'Aqoxy7G02560' => 'aox', 'Aqoxy7G03765' => 'aox', 'arahy.Tifrunner.gnm1.ann1.F05SPM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IM92EC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM7X4M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S0HKZV' => 'arhy', 'AT1G12040' => 'ath', 'AT1G49490' => 'ath', 'AT1G62440' => 'ath', 'AT2G15880' => 'ath', 'AT2G19780' => 'ath', 'AT3G19020' => 'ath', 'AT3G22800' => 'ath', 'AT3G24480' => 'ath', 'AT4G13340' => 'ath', 'AT4G18670' => 'ath', 'AT4G28380' => 'ath', 'AT4G29240' => 'ath', 'AT4G33970' => 'ath', 'AT5G25550' => 'ath', 'ATR0217G003' => 'atr', 'ATR0618G020' => 'atr', 'ATR0618G044' => 'atr', 'ATR0626G144' => 'atr', 'ATR0626G224' => 'atr', 'ATR0665G555' => 'atr', 'ATR0705G037' => 'atr', 'ATR1120G123' => 'atr', 'Atru.chr13.597' => 'acertr', 'Atru.chr5.2839' => 'acertr', 'Atru.chr6.2896' => 'acertr', 'Atru.chr7.1315' => 'acertr', 'Atru.chr7.1498' => 'acertr', 'AUR62011013' => 'cqu', 'AUR62011412' => 'cqu', 'AUR62016647' => 'cqu', 'AUR62020629' => 'cqu', 'AUR62021366' => 'cqu', 'AUR62021524' => 'cqu', 'AUR62023041' => 'cqu', 'AUR62033278' => 'cqu', 'AUR62033641' => 'cqu', 'AUR62033644' => 'cqu', 'AUR62034738' => 'cqu', 'AUR62034739' => 'cqu', 'AUR62038754' => 'cqu', 'AUR62038888' => 'cqu', 'AUR62038891' => 'cqu', 'AUR62038892' => 'cqu', 'AUR62038970' => 'cqu', 'AUR62044343' => 'cqu', 'BcaB02g06432' => 'bca', 'BcaB03g11865' => 'bca', 'BcaB03g14583' => 'bca', 'BcaB03g16337' => 'bca', 'BcaB04g17707' => 'bca', 'BcaB04g19019' => 'bca', 'BcaB04g20500' => 'bca', 'BcaB04g20727' => 'bca', 'BcaB06g26396' => 'bca', 'BcaB07g31327' => 'bca', 'BcaB08g34615' => 'bca', 'BcaB08g34885' => 'bca', 'BcaB08g37433' => 'bca', 'BcaC01g00944' => 'bca', 'BcaC01g03049' => 'bca', 'BcaC01g03310' => 'bca', 'BcaC01g03657' => 'bca', 'BcaC04g22399' => 'bca', 'BcaC04g22827' => 'bca', 'BcaC05g25228' => 'bca', 'BcaC05g28014' => 'bca', 'BcaC07g37039' => 'bca', 'BcaC07g41235' => 'bca', 'BcaC07g41736' => 'bca', 'BcaC07g41752' => 'bca', 'BcaC09g48868' => 'bca', 'BcaC09g49198' => 'bca', 'BcaC09g50483' => 'bca', 'BcaC09g51465' => 'bca', 'BcaNung00471' => 'bca', 'BcaNung00472' => 'bca', 'BcaNung01572' => 'bca', 'BcaNung03353' => 'bca', 'BcaNung03354' => 'bca', 'BcaNung03784' => 'bca', 'BcaNung05501' => 'bca', 'BolC1t00465H' => 'bol', 'BolC1t01243H' => 'bol', 'BolC1t02434H' => 'bol', 'BolC1t04106H' => 'bol', 'BolC1t04469H' => 'bol', 'BolC3t17292H' => 'bol', 'BolC3t17644H' => 'bol', 'BolC3t17952H' => 'bol', 'BolC3t20908H' => 'bol', 'BolC5t29860H' => 'bol', 'BolC5t32771H' => 'bol', 'BolC7t44755H' => 'bol', 'BolC7t46160H' => 'bol', 'BolC7t46449H' => 'bol', 'BolC8t47203H' => 'bol', 'BolC8t49145H' => 'bol', 'BolC8t51802H' => 'bol', 'BolC8t52312H' => 'bol', 'BolC9t54390H' => 'bol', 'BolC9t54879H' => 'bol', 'BraA01t00429Z' => 'bra', 'BraA01t01017Z' => 'bra', 'BraA01t01911Z' => 'bra', 'BraA01t03368Z' => 'bra', 'BraA01t03627Z' => 'bra', 'BraA03t13254Z' => 'bra', 'BraA03t13504Z' => 'bra', 'BraA03t13695Z' => 'bra', 'BraA03t14946Z' => 'bra', 'BraA03t15317Z' => 'bra', 'BraA05t21478Z' => 'bra', 'BraA06t24130Z' => 'bra', 'BraA06t26548Z' => 'bra', 'BraA07t28282Z' => 'bra', 'BraA08t32419Z' => 'bra', 'BraA08t33686Z' => 'bra', 'BraA08t35226Z' => 'bra', 'BraA09t36903Z' => 'bra', 'BraA09t37264Z' => 'bra', 'BraA09t41296Z' => 'bra', 'BraA09t41759Z' => 'bra', 'C01p04810' => 'bna', 'C01p12660' => 'bna', 'C01p24890' => 'bna', 'C01p41500' => 'bna', 'C01p45000' => 'bna', 'C03p50010' => 'bna', 'C03p53800' => 'bna', 'C03p56680' => 'bna', 'C03p86200' => 'bna', 'C05p11120' => 'bna', 'C05p40300' => 'bna', 'C07p42270' => 'bna', 'C07p56820' => 'bna', 'C07p60090' => 'bna', 'C08p04080' => 'bna', 'C08p08490' => 'bna', 'C08p15150' => 'bna', 'C08p42410' => 'bna', 'C08p47750' => 'bna', 'C09p14910' => 'bna', 'C09p19770' => 'bna', 'CAN.G1002.1' => 'can', 'CAN.G1402.10' => 'can', 'CAN.G209.34' => 'can', 'CAN.G322.74' => 'can', 'CAN.G322.77' => 'can', 'CAN.G341.9' => 'can', 'CAN.G42.4' => 'can', 'CAN.G713.30' => 'can', 'CAN.G713.31' => 'can', 'CAN.G919.46' => 'can', 'CANSAT25G2197' => 'cansat', 'CANSAT56G4034' => 'cansat', 'CANSAT64G0438' => 'cansat', 'CANSAT78G0158' => 'cansat', 'CANSAT78G2325' => 'cansat', 'CANSAT80G1641' => 'cansat', 'CARHR012400' => 'chi', 'CARHR039510' => 'chi', 'CARHR094440' => 'chi', 'CARHR098640' => 'chi', 'CARHR098650' => 'chi', 'CARHR100560' => 'chi', 'CARHR106210' => 'chi', 'CARHR110240' => 'chi', 'CARHR187830' => 'chi', 'CARHR218880' => 'chi', 'CARHR225530' => 'chi', 'CARHR236120' => 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'DCAR_024180' => 'dca', 'DCAR_028725' => 'dca', 'DCAR_029012' => 'dca', 'DCAR_030681' => 'dca', 'Dinv04813' => 'din', 'Dinv14035' => 'din', 'Dinv23602' => 'din', 'Dinv26499' => 'din', 'Dinv30231' => 'din', 'Dinv35875' => 'din', 'Dinv36611' => 'din', 'Dinv36713' => 'din', 'Dinv41586' => 'din', 'Duzib041G0097' => 'dzi', 'Duzib052G0906' => 'dzi', 'Duzib052G0944' => 'dzi', 'Duzib093G0901' => 'dzi', 'Duzib132G0639' => 'dzi', 'Duzib150G0488' => 'dzi', 'Duzib150G0813' => 'dzi', 'Duzib151G0178' => 'dzi', 'Duzib168G0174' => 'dzi', 'Duzib168G1315' => 'dzi', 'Duzib168G1540' => 'dzi', 'Duzib170G0570' => 'dzi', 'Duzib187G1465' => 'dzi', 'Duzib187G1908' => 'dzi', 'ECA234G2773' => 'eca', 'ECA234G3525' => 'eca', 'ECA234G3799' => 'eca', 'ECA236G0333' => 'eca', 'ECA236G1787' => 'eca', 'ECA238G1374' => 'eca', 'ECA240G0031' => 'eca', 'ECA240G0608' => 'eca', 'ECA240G2707' => 'eca', 'ECA240G4728' => 'eca', 'ECA246G3170' => 'eca', 'EL10Ac2g03717' => 'bvu', 'EL10Ac3g06464' => 'bvu', 'EL10Ac8g18352' => 'bvu', 'EL10Ac8g18519' => 'bvu', 'EL10Ac9g20795' => 'bvu', 'EL10Ac9g21804' => 'bvu', 'Eucgr.C00960' => 'egr', 'Eucgr.C03706' => 'egr', 'Eucgr.H03422' => 'egr', 'Eucgr.K01044' => 'egr', 'FAN11G1367' => 'fan', 'FAN12G2444' => 'fan', 'FAN14G3854' => 'fan', 'FAN15G1361' => 'fan', 'FAN15G3644' => 'fan', 'FAN16G1160' => 'fan', 'FAN17G1248' => 'fan', 'FAN17G1772' => 'fan', 'FAN19G0529' => 'fan', 'FAN19G1225' => 'fan', 'FAN20G0453' => 'fan', 'FAN20G1712' => 'fan', 'FAN21G1278' => 'fan', 'FAN22G0074' => 'fan', 'FAN23G0940' => 'fan', 'FAN23G1261' => 'fan', 'FAN24G0833' => 'fan', 'FAN24G2877' => 'fan', 'FAN25G1029' => 'fan', 'FAN26G0859' => 'fan', 'FAN26G1793' => 'fan', 'FAN26G1889' => 'fan', 'FAN26G2925' => 'fan', 'FAN27G2765' => 'fan', 'FAN28G0199' => 'fan', 'FAN28G1144' => 'fan', 'FvH4_1g05180' => 'fve', 'FvH4_1g06510' => 'fve', 'FvH4_2g07100' => 'fve', 'FvH4_2g30240' => 'fve', 'FvH4_3g06800' => 'fve', 'FvH4_4g00070' => 'fve', 'FvH4_4g00870' => 'fve', 'FvH4_6g26510' => 'fve', 'Glyma.01G005600' => 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=> 'ghi', 'Gohir.D12G026400' => 'ghi', 'Gohir.D13G035500' => 'ghi', 'Gohir.D13G035600' => 'ghi', 'Gohir.D13G200600' => 'ghi', 'Gorai.001G004000' => 'gra', 'Gorai.002G019800' => 'gra', 'Gorai.002G130500' => 'gra', 'Gorai.004G274900' => 'gra', 'Gorai.008G026700' => 'gra', 'Gorai.009G023700' => 'gra', 'Gorai.009G028700' => 'gra', 'Gorai.010G078700' => 'gra', 'Gorai.011G172700' => 'gra', 'Gorai.012G009700' => 'gra', 'Gorai.012G132500' => 'gra', 'Gorai.012G150700' => 'gra', 'Gorai.013G040300' => 'gra', 'Gorai.013G040400' => 'gra', 'Gorai.013G229400' => 'gra', 'GSVIVG01015276001' => 'vvi', 'GSVIVG01015416001' => 'vvi', 'GSVIVG01018025001' => 'vvi', 'GSVIVG01020574001' => 'vvi', 'GSVIVG01031843001' => 'vvi', 'HanXRQChr01g0004111' => 'han', 'HanXRQChr03g0068311' => 'han', 'HanXRQChr03g0072131' => 'han', 'HanXRQChr03g0077861' => 'han', 'HanXRQChr05g0138021' => 'han', 'HanXRQChr05g0143181' => 'han', 'HanXRQChr06g0171441' => 'han', 'HanXRQChr06g0172081' => 'han', 'HanXRQChr07g0201711' => 'han', 'HanXRQChr09g0251691' => 'han', 'HanXRQChr10g0303391' => 'han', 'HanXRQChr10g0318951' => 'han', 'HanXRQChr12g0355651' => 'han', 'Haze_02470' => 'cav', 'Haze_11217' => 'cav', 'Haze_13202' => 'cav', 'Haze_17588' => 'cav', 'Haze_21241' => 'cav', 'Haze_25695' => 'cav', 'Haze_25846' => 'cav', 'Hma1.2p1_0003F.1_g003540' => 'hma', 'Hma1.2p1_0012F.1_g007460' => 'hma', 'Hma1.2p1_0018F.1_g013260' => 'hma', 'Hma1.2p1_0023F.1_g015310' => 'hma', 'Hma1.2p1_0394F.1_g143300' => 'hma', 'Hma1.2p1_0549F.1_g176850' => 'hma', 'Hma1.2p1_0663F.1_g198490' => 'hma', 'HPP92_002115' => 'vpl', 'HPP92_002131' => 'vpl', 'HPP92_002136' => 'vpl', 'HPP92_005545' => 'vpl', 'HPP92_008076' => 'vpl', 'HPP92_009108' => 'vpl', 'HPP92_011823' => 'vpl', 'HPP92_017042' => 'vpl', 'HPP92_017372' => 'vpl', 'HPP92_018609' => 'vpl', 'HPP92_021367' => 'vpl', 'HPP92_021368' => 'vpl', 'HPP92_024079' => 'vpl', 'HPP92_024291' => 'vpl', 'HPP92_024306' => 'vpl', 'Lalb_Chr03g0029551' => 'lal', 'Lalb_Chr04g0258831' => 'lal', 'Lalb_Chr05g0223391' => 'lal', 'Lalb_Chr08g0245711' => 'lal', 'Lalb_Chr10g0095401' => 'lal', 'Lalb_Chr14g0371411' => 'lal', 'Lalb_Chr14g0375191' => 'lal', 'Lalb_Chr22g0349881' => 'lal', 'Lalb_Chr22g0352911' => 'lal', 'Lalb_Chr23g0266831' => 'lal', 'Lalb_Chr24g0397671' => 'lal', 'Lj1g0024879' => 'lja', 'Lj1P713T35' => 'lonja', 'Lj2g0000816' => 'lja', 'Lj2g0002455' => 'lja', 'Lj2g0011897' => 'lja', 'Lj3g0013166' => 'lja', 'Lj4g0000444' => 'lja', 'Lj4g0024065' => 'lja', 'Lj4P370T15' => 'lonja', 'Lj4P775T23' => 'lonja', 'Lj5g0026294' => 'lja', 'Lj6P610T26' => 'lonja', 'Lj7P646T19' => 'lonja', 'Lj7P668T34' => 'lonja', 'Lj7P711T18' => 'lonja', 'Lj9P364T38' => 'lonja', 'Lsat_1_v5_gn_2_117961' => 'lsa', 'Lsat_1_v5_gn_3_108581' => 'lsa', 'Lsat_1_v5_gn_5_117420' => 'lsa', 'Lsat_1_v5_gn_5_117540' => 'lsa', 'Lsat_1_v5_gn_5_146540' => 'lsa', 'Lsat_1_v5_gn_7_56981' => 'lsa', 'Lsat_1_v5_gn_8_69601' => 'lsa', 'Lsat_1_v5_gn_8_88181' => 'lsa', 'Lsat_1_v5_gn_8_93601' => 'lsa', 'Lsat_1_v5_gn_9_109041' => 'lsa', 'Manes.03G028700' => 'mes', 'Manes.03G066661' => 'mes', 'Manes.03G174200' => 'mes', 'Manes.03G174300' => 'mes', 'Manes.04G063801' => 'mes', 'Manes.11G099850' => 'mes', 'Manes.13G144700' => 'mes', 'Manes.15G031800' => 'mes', 'Manes.15G031900' => 'mes', 'Manes.16G068900' => 'mes', 'Manes.16G070201' => 'mes', 'Manes.16G107000' => 'mes', 'Manes.18G026715' => 'mes', 'Manes.18G143800' => 'mes', 'Mapoly0025s0139' => 'mpo', 'Mapoly0186s0001' => 'mpo', 'MBI01_g10299_MAGBIO' => 'mbi', 'MBI04_g07001_MAGBIO' => 'mbi', 'MBI05_g15477_MAGBIO' => 'mbi', 'MBI11_g07536_MAGBIO' => 'mbi', 'MBI11_g07537_MAGBIO' => 'mbi', 'MBI11_g36341_MAGBIO' => 'mbi', 'MBI11_g47456_MAGBIO' => 'mbi', 'MBI16_g19893_MAGBIO' => 'mbi', 'MBI16_g31475_MAGBIO' => 'mbi', 'MBI18_g34215_MAGBIO' => 'mbi', 'MD04G1000500' => 'mdo', 'MD05G1073600' => 'mdo', 'MD05G1294100' => 'mdo', 'MD07G1230100' => 'mdo', 'MD08G1135200' => 'mdo', 'MD09G1216000' => 'mdo', 'MD10G1087900' => 'mdo', 'MD10G1272100' => 'mdo', 'MD10G1272200' => 'mdo', 'MD15G1114000' => 'mdo', 'MD15G1188400' => 'mdo', 'MD15G1200000' => 'mdo', 'MD16G1198100' => 'mdo', 'MD17G1236200' => 'mdo', 'Medtr1g034180' => 'mtr', 'Medtr1g103080' => 'mtr', 'Medtr1g103090' => 'mtr', 'Medtr3g100950' => 'mtr', 'Medtr4g078535' => 'mtr', 'Medtr6g086115' => 'mtr', 'Medtr6g090080' => 'mtr', 'Medtr8g102260' => 'mtr', 'Medtr8g103700' => 'mtr', 'MELO3C004550.2' => 'cme', 'MELO3C004602.2' => 'cme', 'MELO3C006506.2' => 'cme', 'MELO3C015426.2' => 'cme', 'MELO3C018704.2' => 'cme', 'MELO3C021193.2' => 'cme', 'MELO3C021194.2' => 'cme', 'MELO3C021195.2' => 'cme', 'MELO3C025324.2' => 'cme', 'MELO3C034935.2' => 'cme', 'Migut.A00262' => 'egut', 'Migut.B00298' => 'egut', 'Migut.G00373' => 'egut', 'Migut.G00374' => 'egut', 'Migut.J00864' => 'egut', 'Migut.J01081' => 'egut', 'Migut.K00471' => 'egut', 'Migut.K00556' => 'egut', 'Migut.L00506' => 'egut', 'Migut.N01209' => 'egut', 'Migut.O00323' => 'egut', 'Migut.O00327' => 'egut', 'MSTRG.10682' => 'ama', 'MSTRG.27716' => 'ama', 'MSTRG.4054' => 'ama', 'MSTRG.6027' => 'ama', 'MSTRG.6805' => 'ama', 'MSTRG.9959' => 'ama', 'Nitab4.5_0000085g0040' => 'nta', 'Nitab4.5_0000380g0030' => 'nta', 'Nitab4.5_0000638g0080' => 'nta', 'Nitab4.5_0001184g0090' => 'nta', 'Nitab4.5_0001401g0080' => 'nta', 'Nitab4.5_0001752g0010' => 'nta', 'Nitab4.5_0002138g0120' => 'nta', 'Nitab4.5_0002350g0070' => 'nta', 'Nitab4.5_0002573g0060' => 'nta', 'Nitab4.5_0002577g0070' => 'nta', 'Nitab4.5_0003249g0040' => 'nta', 'Nitab4.5_0005466g0010' => 'nta', 'Nitab4.5_0008897g0010' => 'nta', 'Nitab4.5_0009945g0020' => 'nta', 'Nitab4.5_0011535g0030' => 'nta', 'Nn1g02411' => 'nnu', 'Nn1g06479' => 'nnu', 'Nn5g26950' => 'nnu', 'Nn6g34403' => 'nnu', 'Nn6g35358' => 'nnu', 'Nn7g37193' => 'nnu', 'Nn8g39024' => 'nnu', 'Nn8g39237' => 'nnu', 'Oeu000269.1' => 'oeu', 'Oeu000953.1' => 'oeu', 'Oeu007244.1' => 'oeu', 'Oeu008864.1' => 'oeu', 'Oeu018268.3' => 'oeu', 'Oeu021236.1' => 'oeu', 'Oeu035507.1' => 'oeu', 'Oeu036250.1' => 'oeu', 'Oeu045168.1' => 'oeu', 'Oeu048302.1' => 'oeu', 'Oeu053308.1' => 'oeu', 'Oeu057668.1' => 'oeu', 'Os01g0180000' => 'osa', 'Os01g0356900' => 'osa', 'Os01g0594300' => 'osa', 'Os02g0138000' => 'osa', 'Os03g0637600' => 'osa', 'Os03g0795300' => 'osa', 'Os05g0180300' => 'osa', 'Os05g0188700' => 'osa', 'Os07g0176500' => 'osa', 'Os11g0657400' => 'osa', 'Os12g0542200' => 'osa', 'Peaxi162Scf00003g00203' => 'pax', 'Peaxi162Scf00016g00136' => 'pax', 'Peaxi162Scf00025g00291' => 'pax', 'Peaxi162Scf00098g00073' => 'pax', 'Peaxi162Scf00298g00021' => 'pax', 'Peaxi162Scf00520g00051' => 'pax', 'Peaxi162Scf00546g00038' => 'pax', 'Peaxi162Scf00560g00042' => 'pax', 'Peaxi162Scf00824g00021' => 'pax', 'Peaxi162Scf01415g00005' => 'pax', 'PGR004G0101' => 'pgr', 'PGR042G0643' => 'pgr', 'PGR083G2816' => 'pgr', 'PGR102G2202' => 'pgr', 'PGR142G0244' => 'pgr', 'PGR142G2051' => 'pgr', 'PGR142G2671' => 'pgr', 'PGR142G3229' => 'pgr', 'PGR142G4156' => 'pgr', 'PGSC0003DMG400000386' => 'stu', 'PGSC0003DMG400001072' => 'stu', 'PGSC0003DMG400006027' => 'stu', 'PGSC0003DMG400015449' => 'stu', 'PGSC0003DMG400015957' => 'stu', 'PGSC0003DMG400016899' => 'stu', 'PGSC0003DMG400025926' => 'stu', 'PGSC0003DMG400032828' => 'stu', 'PGSC0003DMG401005927' => 'stu', 'Phvul.002G307200' => 'pvu', 'Phvul.002G314200' => 'pvu', 'Phvul.003G011500' => 'pvu', 'Phvul.004G161500' => 'pvu', 'Phvul.004G174100' => 'pvu', 'Phvul.007G060800' => 'pvu', 'Phvul.009G062000' => 'pvu', 'Phvul.011G115300' => 'pvu', 'Potri.004G146350' => 'ptr', 'Potri.006G081200' => 'ptr', 'Potri.006G152800' => 'ptr', 'Potri.006G158814' => 'ptr', 'Potri.006G245600' => 'ptr', 'Potri.007G139200' => 'ptr', 'Potri.009G108100' => 'ptr', 'Potri.010G083000' => 'ptr', 'Potri.010G083100' => 'ptr', 'Potri.014G036700' => 'ptr', 'Potri.018G035100' => 'ptr', 'Potri.018G075900' => 'ptr', 'Potri.018G151000' => 'ptr', 'Pp3c12_22970' => 'ppa', 'Pp3c1_10970' => 'ppa', 'Pp3c3_36180' => 'ppa', 'Pp3c4_3520' => 'ppa', 'Pp3c8_3600' => 'ppa', 'Prupe.1G000500' => 'ppe', 'Prupe.1G019600' => 'ppe', 'Prupe.1G465200' => 'ppe', 'Prupe.3G139500' => 'ppe', 'Prupe.4G069900' => 'ppe', 'Prupe.5G056300' => 'ppe', 'Prupe.7G217200' => 'ppe', 'Prupe.7G228100' => 'ppe', 'Prupe.8G113900' => 'ppe', 'Psat0s5396g0080' => 'psa', 'Psat1g038280' => 'psa', 'Psat1g048680' => 'psa', 'Psat6g096440' => 'psa', 'Psat6g205760' => 'psa', 'Psat7g013960' => 'psa', 'Psat7g018280' => 'psa', 'Psat7g168680' => 'psa', 'PSO063G0177' => 'pso', 'PSO063G6047' => 'pso', 'PSO170G0042' => 'pso', 'PSO170G3441' => 'pso', 'PSO170G4428' => 'pso', 'PSO170G5014' => 'pso', 'PSO210G0871' => 'pso', 'PSO210G1221' => 'pso', 'PSO210G2023' => 'pso', 'PSO210G2110' => 'pso', 'PSO210G4944' => 'pso', 'PSO210G6314' => 'pso', 'PSO210G6739' => 'pso', 'PSO210G7445' => 'pso', 'PSO541G2295' => 'pso', 'PSO541G6045' => 'pso', 'PSO675G0728' => 'pso', 'PSO675G8251' => 'pso', 'PSO832G0010' => 'pso', 'PSO832G3621' => 'pso', 'QL02p006431' => 'qlo', 'QL02p040623' => 'qlo', 'QL02p085838' => 'qlo', 'QL06p001365' => 'qlo', 'QL08p039667' => 'qlo', 'QL11p005692' => 'qlo', 'QL11p039023' => 'qlo', 'QL11p040309' => 'qlo', 'QL12p031073' => 'qlo', 'RcHm_v2.0_Chr2g0090891' => 'rch', 'RcHm_v2.0_Chr2g0092261' => 'rch', 'RcHm_v2.0_Chr2g0127651' => 'rch', 'RcHm_v2.0_Chr4g0387491' => 'rch', 'RcHm_v2.0_Chr5g0012341' => 'rch', 'RcHm_v2.0_Chr6g0259591' => 'rch', 'RcHm_v2.0_Chr6g0312631' => 'rch', 'Rhsim01G0101700' => 'rsi', 'Rhsim03G0236100' => 'rsi', 'Rhsim05G0028400' => 'rsi', 'Rhsim05G0079500' => 'rsi', 'Rhsim06G0139300' => 'rsi', 'Rhsim07G0154800' => 'rsi', 'Rhsim11G0169900' => 'rsi', 'RhsimUnG0025900' => 'rsi', 'RhsimUnG0086000' => 'rsi', 'Sabra04G0096800' => 'sbr', 'Sabra06G0061300' => 'sbr', 'Sabra06G0121000' => 'sbr', 'Sabra06G0192200' => 'sbr', 'Sabra07G0112200' => 'sbr', 'Sabra07G0118400' => 'sbr', 'Sabra10G0059900' => 'sbr', 'Sabra10G0060100' => 'sbr', 'Sabra18G0065100' => 'sbr', 'SalBow1G8152' => 'sbo', 'SalBow2G0064' => 'sbo', 'SalBow6G1772' => 'sbo', 'SalBow6G5184' => 'sbo', 'SalBow7G0860' => 'sbo', 'SalBow7G3860' => 'sbo', 'Sc02g0006760' => 'sci', 'Sc08g0007350' => 'sci', 'Sc08g0008110' => 'sci', 'Sc09g0007910' => 'sci', 'Sc12g0003140' => 'sci', 'Sc13g0004630' => 'sci', 'Sc14g0001680' => 'sci', 'Sc15g0006560' => 'sci', 'Sc18g0001120' => 'sci', 'Sed0000577' => 'sed', 'Sed0002905' => 'sed', 'Sed0006716' => 'sed', 'Sed0007532' => 'sed', 'Sed0010005' => 'sed', 'Sed0011918' => 'sed', 'Sed0013925' => 'sed', 'Sed0015017' => 'sed', 'Sed0021753' => 'sed', 'Sed0026732' => 'sed', 'SEGI_07443' => 'sgi', 'SEGI_15617' => 'sgi', 'SEGI_22093' => 'sgi', 'SEGI_24079' => 'sgi', 'SEGI_31073' => 'sgi', 'SGA_v2.0_scaffold13G06569' => 'sas', 'SGA_v2.0_scaffold151G36694' => 'sas', 'SGA_v2.0_scaffold19G08700' => 'sas', 'SGA_v2.0_scaffold21G09581' => 'sas', 'SGA_v2.0_scaffold280G46841' => 'sas', 'SGA_v2.0_scaffold318G48502' => 'sas', 'SGA_v2.0_scaffold55G19829' => 'sas', 'SGA_v2.0_scaffold58G20599' => 'sas', 'SGA_v2.0_scaffold70G23514' => 'sas', 'SHI02631' => 'shi', 'SHI02770' => 'shi', 'SHI05490' => 'shi', 'SMO134G0212' => 'smo', 'SMO236G0073' => 'smo', 'SMO276G0056' => 'smo', 'SMO356G0686' => 'smo', 'Solyc01g108900.4' => 'sly', 'Solyc05g026240.3' => 'sly', 'Solyc06g074150.3' => 'sly', 'Solyc07g053840.1' => 'sly', 'Solyc09g082530.3' => 'sly', 'Solyc10g050470.3' => 'sly', 'Solyc11g005150.3' => 'sly', 'Solyc12g006973.1' => 'sly', 'Solyc12g006980.2' => 'sly', 'Solyc12g088950.3' => 'sly', 'Sopen01g051100' => 'spe', 'Sopen05g022480' => 'spe', 'Sopen06g024030' => 'spe', 'Sopen07g027810' => 'spe', 'Sopen09g031390' => 'spe', 'Sopen10g022120' => 'spe', 'Sopen11g001150' => 'spe', 'Sopen12g002930' => 'spe', 'Sopen12g002940' => 'spe', 'Sopen12g030850' => 'spe', 'Sp1g10710' => 'spa', 'Sp1g36330' => 'spa', 'Sp2g02160' => 'spa', 'Sp2g21990' => 'spa', 'Sp3g17120' => 'spa', 'Sp3g20500' => 'spa', 'Sp3g22250' => 'spa', 'Sp3g33130' => 'spa', 'Sp7g10890' => 'spa', 'Sp7g26340' => 'spa', 'Sp7g27170' => 'spa', 'Sp7g31700' => 'spa', 'TAR362G1258' => 'tar', 'TAR381G0712' => 'tar', 'TAR383G0390' => 'tar', 'TAR383G0417' => 'tar', 'TAR624G0047' => 'tar', 'TAR624G0408' => 'tar', 'TAR626G0042' => 'tar', 'TAR626G1488' => 'tar', 'TAR636G2569' => 'tar', 'TAR636G2768' => 'tar', 'THA.LOC104799877' => 'tha', 'THA.LOC104803446' => 'tha', 'THA.LOC104807345' => 'tha', 'THA.LOC104808756' => 'tha', 'THA.LOC104809473' => 'tha', 'THA.LOC104814587' => 'tha', 'THA.LOC104820036' => 'tha', 'THA.LOC104824543' => 'tha', 'THA.LOC104827555' => 'tha', 'Thecc.02G093700' => 'tca', 'Thecc.02G182600' => 'tca', 'Thecc.04G236900' => 'tca', 'Thecc.08G016500' => 'tca', 'Thecc.09G097600' => 'tca', 'Thecc.09G113200' => 'tca', 'Thecc.09G143000' => 'tca', 'Thecc.09G202500' => 'tca', 'Thhalv10002007m.g' => 'esa', 'Thhalv10004209m.g' => 'esa', 'Thhalv10006975m.g' => 'esa', 'Thhalv10012214m.g' => 'esa', 'Thhalv10022219m.g' => 'esa', 'Thhalv10022433m.g' => 'esa', 'Thhalv10023190m.g' => 'esa', 'Thhalv10023291m.g' => 'esa', 'Thhalv10024510m.g' => 'esa', 'Thhalv10024590m.g' => 'esa', 'Thhalv10025361m.g' => 'esa', 'Thhalv10027136m.g' => 'esa', 'Thhalv10027574m.g' => 'esa', 'TPR.G21690' => 'tpr', 'TPR.G23461' => 'tpr', 'TPR.G26032' => 'tpr', 'TPR.G26098' => 'tpr', 'TPR.G2888' => 'tpr', 'TPR.G33514' => 'tpr', 'TWI09G0453' => 'twi', 'TWI23G0803' => 'twi', 'TWI31G1010' => 'twi', 'TWI32G0480' => 'twi', 'TWI32G0627' => 'twi', 'TWI34G0195' => 'twi', 'TWI34G1207' => 'twi', 'TWI34G1685' => 'twi', 'TWI34G1924' => 'twi', 'TWI36G1334' => 'twi', 'TWI63G1736' => 'twi', 'TWI75G1358' => 'twi', 'TWI79G1237' => 'twi', 'vmacro06258' => 'vma', 'vmacro08362' => 'vma', 'vmacro20660' => 'vma', 'vmacro20728' => 'vma', 'vmacro23068' => 'vma', 'VMungo0251G1432' => 'vmu', 'VMungo0251G3310' => 'vmu', 'VMungo0464G0849' => 'vmu', 'VMungo0464G1287' => 'vmu', 'VMungo0720G2576' => 'vmu', 'VMungo1127G0267' => 'vmu', 'Zm00001eb001800' => 'zma', 'Zm00001eb060360' => 'zma', 'Zm00001eb060610' => 'zma', 'Zm00001eb105520' => 'zma', 'Zm00001eb115720' => 'zma', 'Zm00001eb122210' => 'zma', 'Zm00001eb131570' => 'zma', 'Zm00001eb161110' => 'zma', 'Zm00001eb165660' => 'zma', 'Zm00001eb182200' => 'zma', 'Zm00001eb213010' => 'zma', 'Zm00001eb231880' => 'zma', 'Zm00001eb272780' => 'zma', 'Zm00001eb283470' => 'zma', 'Zm00001eb283750' => 'zma', 'Zm00001eb337150' => 'zma', 'Zm00001eb346980' => 'zma', 'Zm00001eb410370' => 'zma' ) $gf_id = 'HOM05D000546' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000546' ) $data_identifier = 'HOM05D000546' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 42, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 9, 'aly' => (int) 14, 'aox' => (int) 8, 'arhy' => (int) 4, 'ath' => (int) 14, 'atr' => (int) 8, 'acertr' => (int) 5, 'cqu' => (int) 18, 'bca' => (int) 36, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 10, 'cansat' => (int) 6, 'chi' => (int) 14, 'cru' => (int) 11, 'car' => (int) 7, 'ccan' => (int) 7, 'cde' => (int) 12, 'cfa' => (int) 9, 'ccl' => (int) 9, 'cil' => (int) 8, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 5, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 14, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 4, 'fan' => (int) 26, 'fve' => (int) 8, 'gma' => (int) 14, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 7, 'hma' => (int) 7, 'vpl' => (int) 15, 'lal' => (int) 11, 'lja' => (int) 8, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 14, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 14, 'mtr' => (int) 9, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 6, 'nta' => (int) 15, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 5, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 20, 'qlo' => (int) 9, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 9, 'sed' => (int) 10, 'sgi' => (int) 5, 'sas' => (int) 9, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 12, 'tar' => (int) 10, 'tha' => (int) 9, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 6, 'twi' => (int) 13, 'vma' => (int) 5, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb410370' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1